PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast07G145000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 480aa    MW: 52406.8 Da    PI: 7.247
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast07G145000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.31.3e-31552331128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....lelee.............vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkr 73 
                         lp+G++F+Ptd+el+ e+L++kv++      +   e             +i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+r
  Brast07G145000.1.p  55 LPAGVKFDPTDQELI-EHLEAKVQSGGaaaaV---EaaeshplidefipTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTR 140
                         799************.99******99966551...134566666676555776646**********.556667799*************** PP

                 NAM  74 knra.....................................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmhe 125
                         k+r+                                      ++ +W++tgk+++v + +g++ g+kk+Lv+y   g+++k+ekt+Wvmh+
  Brast07G145000.1.p 141 KRRKiqppaatavdasaaisssaatgasscsshqqqqqqqmRSETRWHKTGKTRPVAV-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQ 230
                         ***88*******************************9998756889************.99************5547999999******** PP

                 NAM 126 yrl 128
                         y+l
  Brast07G145000.1.p 231 YHL 233
                         *98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-3449145IPR003441NAC domain
PROSITE profilePS5100526.34855252IPR003441NAC domain
PfamPF023655.6E-1556233IPR003441NAC domain
SuperFamilySSF1019412.35E-34183252IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MDGRAADARE AGASGGGCGH PIGSRIEEHR KYMSESSCCP RCGHKIDRKL DWVGLPAGVK  60
FDPTDQELIE HLEAKVQSGG AAAAVEAAES HPLIDEFIPT IEGEDGICYT HPEKLPGVSK  120
DGLSRHFFHR PSKAYTTGTR KRRKIQPPAA TAVDASAAIS SSAATGASSC SSHQQQQQQQ  180
MRSETRWHKT GKTRPVAVGG RQRGCKKILV LYTNFGKHRK PEKTNWVMHQ YHLGESEEER  240
EGELVVSKIF YQTQPRQCGA TDASVERRSR DRAAAAPQMQ ASSDVMTIAA FPGHGGAGGI  300
DEFSFEQFRS SFDEQVGTGD HQVAQARADE GVLHRHQQQH QHQVGEHDHR RRHQLHYTGV  360
LLQEQQQRAA AVAACHVSTP TDPISTLIAA PPQVHQGSFV LAAPADQPYD HGAPSYHQQE  420
DERPHQTPKF DGRSTSGLEE VIMGCTSRRS KGGESSGGKE GAGWQYPSFW PSDNQDHHG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126142e-94CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010227603.10.0PREDICTED: uncharacterized protein LOC100835793
TrEMBLA0A0Q3H5480.0A0A0Q3H548_BRADI; Uncharacterized protein
STRINGBGIOSGA021039-PA0.0(Oryza sativa Indica Group)
STRINGLOC_Os06g36480.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145338117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.12e-92NAC domain containing protein 75